6.4 Color | ![]() |
The color of visualized atoms can be changed selecting the items in View -> Color menu (click here for more information). The preselected coloring methods are:
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Color by atom (white = hydrogen, green = carbon, red = oxygen, blue = nitrogen, yellow = sulfur, cyan = fluorine, magenta = chlorine or unknown atom, orange = bromine, violet = iodine). |
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Color by residue |
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Color by chain | |
Color by segment A different color is selected for each segment (e.g. protein, water, ligand) in the molecule or assembly. |
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Color by molecule | |
Color by charge The color ramp indicates the more negative (blue) and the more positive (red). |
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Color by constraint It colors the molecule by constraint: blue fixed, green freed. |
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Using the View -> Color -> Selection menu item, it's possible to choice the color of the visible atoms from the color table, as shown below: