7.4 Molecule colors
The color of visualized atoms can be changed
selecting the items in View
Color menu (click here
for more information). The coloring methods are:
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Color by atom
(white = hydrogen, green = carbon, red = oxygen, blue = nitrogen, yellow = sulfur,
cyan = fluorine, magenta = chlorine or unknown atom, orange = bromine, violet = iodine). |
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Color by segment
A different color is selected for each segment (e.g. protein, water,
ligand) in the molecule or assembly. |
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Color by H-Bond
It colors the H-bond acceptor (blue) and
donor (magenta) atoms. |
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Color by charge
The color ramp indicates the more negative (blue) and the more positive (red). |
Color by constraint
It colors the molecule by constraint: blue
fixed, green freed.
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If you want to change the color schemes, you must use
Color settings dialog. Using the View
Color
Selection
menu item, it's possible to choose the color of the visible atoms from the color table, as
shown below:
To apply the color changes, you must click Ok button or
double click the color box.
